Last updated on 2025-10-12 10:50:32 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.21 | 256.80 | 270.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.38 | 272.12 | 282.50 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 183.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.053, elapsed: 2.289 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.996, system: 0.106, elapsed: 10.964 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.017, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.753, system: 0.220, elapsed: 5.211 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.213 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.240, system: 0.430, elapsed: 19.768 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.647, system: 0.073, elapsed: 2.844 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.166, system: 0.235, elapsed: 17.301 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.018, elapsed: 0.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.038, system: 0.273, elapsed: 6.379 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.008, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.745, system: 0.639, elapsed: 27.925 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.780, system: 0.086, elapsed: 2.687 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.392, system: 0.313, elapsed: 14.218 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.016, elapsed: 0.332 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.908, system: 0.275, elapsed: 5.761 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.008, elapsed: 0.250 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.179, system: 0.236, elapsed: 1.019 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.240, system: 0.969, elapsed: 25.189 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.674, system: 0.083, elapsed: 2.204 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.196, system: 0.300, elapsed: 11.293 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.018, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.030, system: 0.318, elapsed: 5.242 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.010, elapsed: 0.231 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.321, system: 0.551, elapsed: 25.962 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.236, system: 1.322, elapsed: 46.006 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.534, system: 0.049, elapsed: 2.192 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.903, system: 0.101, elapsed: 11.094 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.014, elapsed: 0.234 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.664, system: 0.230, elapsed: 5.157 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.008, elapsed: 0.189 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.006, system: 0.431, elapsed: 19.554 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.551, system: 0.050, elapsed: 1.925 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.023, system: 0.226, elapsed: 11.348 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.232 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.747, system: 0.255, elapsed: 4.818 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.007, elapsed: 0.196 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.209, system: 0.590, elapsed: 19.141 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.698, system: 0.071, elapsed: 2.293 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.113, system: 0.255, elapsed: 11.869 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.211 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.575, system: 0.216, elapsed: 6.037 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.014, elapsed: 0.433 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.081, system: 0.256, elapsed: 1.619 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.441, system: 0.864, elapsed: 23.482 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.053, elapsed: 3.353 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.982, system: 0.117, elapsed: 12.794 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.713, system: 0.253, elapsed: 6.070 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.010, elapsed: 0.368 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.336, system: 0.683, elapsed: 21.867 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.588, system: 1.161, elapsed: 45.959 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64