de367dbaa2201df6f564266eb8e474b5 *DESCRIPTION
b4456e3970b2dca88208376ee8be2b3e *NAMESPACE
7627cbb1055cb4bda7affd2a82853390 *NEWS.md
947bde061ce7b67b9609d2616a5c7b88 *R/Add_boundary_points.R
b1fcc3562a75c5c416018fc8940518d5 *R/Corrected_Tessellations.R
37da89dc17b4ec19b717c5c7ef962a73 *R/DelaunayInfo.R
7155b3af55856d89bef770a85ed59b32 *R/Delete_Outpoints.R
6dd10188dc71af361e961ac0b4618a78 *R/HVTMSM_support.R
18b95f1ca3206dc933a55869f09f2744 *R/HVTMSMoptimization.R
55b9f7b3549c083609b6ec21d8b2811e *R/OptimizationResults.R
d6dabe661f70e92bc2854cfa26c9d881 *R/ScaleMat.R
2b77f56d6a87e59e960aef46177dfc4f *R/Transform_Coordinates.R
2eefc40a7d2f032c27a6bc0c95f39aec *R/VQ_codebookSplit.R
1e3e247d70b2dca7451ef11544e68cca *R/clustHVT.R
491f3301377bea9107748d77f72baa2e *R/clusterPlot.R
d9e88e8ecb53314b4073b7b7e8410025 *R/diagPlot.R
a7fe2e61637a28853e0598735eaa5510 *R/diagSuggestion.R
a47003cfa02fead9d3d69b7b5be44151 *R/displayTable.R
446eab4c7a8ccbf41c5a715a9542a273 *R/edaPlots.R
2f5aa87ba914230e97f4dd62d98be2e1 *R/getCellId.R
4213c870ce4607b59a6f1346e4977286 *R/getCentroids.R
f5ed8e0932a280753e2820024b6285a5 *R/getCentroids_for_opti.R
a3391a288c6a152f31db491ce09e6c4d *R/getOptimalCentroids.R
7d0194d07d30f28b62fc4f823aed2806 *R/getTransitionProbability.R
739f2bbe46a814d9591129d0345a62c0 *R/global.R
0a7758f1d1068a7190dedd35b76cee04 *R/hvq.R
7cbda3a12b17b5fb315ff84de1516583 *R/madPlot.R
e77344b09861a268344e20623c8ddb5a *R/mcmc_plots.R
f40ba7c0f095a640d54a00af38ef5f20 *R/msm.R
7a7f03ef5875a3ea26cbcca4ba54e4e9 *R/plotAnimatedFlowmap.R
fb24eeeb6a2743d70f297882779ab681 *R/plotHVT.R
8c21b658e3b560b214acf9e7d21d395a *R/plotModelDiagnostics.R
7e9a8202cde2f6b53305b38c010efa3d *R/plotMsmKN.R
3fb3c5e4528cbcb0fd45bfd2fe7780f1 *R/plotNovelCells.R
e2603bc3ad9a6f2477bc0fbc741e97e4 *R/plotQuantErrorHistogram.R
48203b9a364304162683964d3f33e770 *R/plotStateTransition.R
68f35ebf55361628423351f2e275965e *R/plotZscore.R
66165b3c9c780c17ad77a2ceb1ab2dc4 *R/reconcileTransitionProbability.R
3e23df4cb86b6fc48ce184b2d926eaf6 *R/removeNovelty.R
633cbf927356fec88043adb5d3f6381e *R/scoreHVT.R
19156fc5803a363f4bdaef7fba726f3a *R/scoreLayeredHVT.R
16404ebc1e446f94a7accfe47dec079d *R/summary.R
57a17a028df997fb28e00ad9522d03ed *R/trainHVT.R
2461d421a7fc2386afe1d887e58a6ee4 *README.md
00b7c4573013646ebc4693076a562062 *build/vignette.rds
171d31a0bd728c9dcb2a6cf39e116668 *inst/doc/HVT.R
3e2c96e9b00e599ca654c762ab6af425 *inst/doc/HVT.Rmd
2e17376a7c3c8a3d6f3af8c7b4e10768 *inst/doc/HVT.html
d92ba97615366f73f98fcd1bb6394cd7 *man/HVTMSMoptimization.Rd
634f71598e97e8678d70f0fd35706026 *man/OptimizationResults.Rd
0da6f95f969e98ca7d17b21a37cd9ea7 *man/clustHVT.Rd
36835c76182fc74684e14294ec71f9ac *man/displayTable.Rd
edd27acc3ec3da245b2e33a73acf64a7 *man/edaPlots.Rd
be0d8b6aa475507751f1f9f3f2b88685 *man/getOptimalCentroids.Rd
b529817e0468ead82ddb27ef79ab7464 *man/getTransitionProbability.Rd
c4c6ad10368f151ec92653ebc15cdf2f *man/mcmc_plots.Rd
d69b60e32e39a887f82335441591d672 *man/msm.Rd
01379b420ab694a181dd4c89da8f1af1 *man/plotAnimatedFlowmap.Rd
28d35d5a26dcecb2fa4acad0882a17e3 *man/plotHVT.Rd
8de46873df63b6085f8669e77404c591 *man/plotModelDiagnostics.Rd
bb55261c7b7413af26fb75a673b5b737 *man/plotMsmKN.Rd
87b98e455981ebd1672fc1d61ee353ff *man/plotNovelCells.Rd
5c1c7cb2025ae3ceeea655256a4133a5 *man/plotQuantErrorHistogram.Rd
5a0374d9b3328f43036ce1c80edf0a2a *man/plotStateTransition.Rd
c357ddce32ac97b8a2f8092b0b357649 *man/plotZscore.Rd
a51c742135361de39d9c35aa81d2f682 *man/reconcileTransitionProbability.Rd
aff8eef50dd85f43af2b4ae29b664cf1 *man/removeNovelty.Rd
2bfbe88567ca6f6461851660eb04e124 *man/scoreHVT.Rd
5e195efe75a03da0700ba66c11768971 *man/scoreLayeredHVT.Rd
4b2171b3adf64f17b6eb99346076934d *man/summary.Rd
96e9b7cdf399814ec7582817a5b907e1 *man/trainHVT.Rd
f28be3625f994c488501886e41ab6c64 *tests/testthat.R
0ff0321d11c549cf62765e165c076aa2 *tests/testthat/testhvt.R
3e2c96e9b00e599ca654c762ab6af425 *vignettes/HVT.Rmd
20e5b8860fc15e80d4bc7e47f6f25430 *vignettes/pngs/HVT_Summary.png
33cad4ee17ac42880853e81702a91cda *vignettes/pngs/distance.png
e68bde98ad9964c6f6765d2d73bee58d *vignettes/pngs/hvt_result_diag.png
73033c43676cd62855da131e4aa528d1 *vignettes/pngs/hvt_results_list.png
7626f37b0a890e001083cf275f28ddd1 *vignettes/pngs/hvt_results_list_score.png
cd4f4dc371727ed3dfbb6af90010a293 *vignettes/pngs/quant_explainer.png
1cac5fa699625314e5e2d376e92e34c6 *vignettes/pngs/reference.png
b4c44e39e1e94452098930113c0f6ca1 *vignettes/pngs/scoreLayeredHVT_function.png
4c37587e41b99baa46bf13178d0ef7cd *vignettes/pngs/scoreLayeredHVT_function_mapA.png
3d0397cb97a6531e1bdba993c3588b9b *vignettes/pngs/scoreLayeredHVT_function_mapB.png
c5c15e344318c552e6c517148444795f *vignettes/pngs/scoreLayeredHVT_function_mapC.png
fd9247dbb740042bbb8a6debc04851f8 *vignettes/pngs/torus2.png
