c08139cf706f76756a3155c64cb3228a *DESCRIPTION
d3623d8223523450901bf8adf08a128f *NAMESPACE
e879598184b9ceaac0c9fee5e52f5172 *NEWS.md
4fdf8d0ffd68bbdf3b09a045378dbc2f *R/RcppExports.R
c25a8deade004c72a0763806885c96ab *R/data.R
cac7937a0c74c7a41e5be31787a4b2c3 *R/filter_pactr-accessors.R
7be785979124b2d3325b27fc04846309 *R/filter_pactr-class.R
6c479055f8ba1525e7e67825c7e13a8e *R/filter_pactr-methods.R
32120a84af1f8377a69b5542483ce06f *R/filters.R
629309081d8bb6054ef9800e196350d3 *R/import_data.R
40aa6b4f56cb3fb57edc786beb79a509 *R/mpactR-package.R
f0b9bf75221f2fe55c7a512a2bc34ac8 *R/mpactr-accessors.R
f8fb07ca2a6f59aaa519f4a0a81769c3 *R/mpactr-class.R
f09168e92519dbee047ca7503f3d3e38 *R/mpactr-methods.R
48baf261084644fc72ab1cefb12f1f53 *R/pactr-class_cloning.R
a96395ab63cb44c233bf356a081bbdc7 *R/peak_table_formatter.R
d3b0b31831581e15e92e487a5e79dc1f *R/qc_graph_pactr-class.R
3fa2638da746ef1097c3edb62ffefc1e *R/quality_control.R
c0b8e592a9f7be05785405de5d26d3c0 *R/statistics.R
74c70544fb5be2cf6d37a7f837fcd724 *R/summary-class.R
362928cc84c48654211e20ceb54d1279 *README.md
295e013ab9bd435f2ae409875526c57d *TODO
1bf18d9c216b8d95033f0bd2fe2906b2 *build/partial.rdb
836e19d6d20a4e6e93cf2fd2d7283cef *build/vignette.rds
797f10fb352a0fcbe1c8ac62fa8ac31c *data/cultures_data.rda
d6bf37717c035b6d38c9854404bec394 *inst/CITATION
8b9a7fe2f47932a5f95dfb28f322329e *inst/doc/downstream_analyses.R
72bf27f88a20235fabb9fb8b4e72e282 *inst/doc/downstream_analyses.Rmd
176b6d0f0851c3d1fd8fd6ef86350e45 *inst/doc/downstream_analyses.html
09120a57855f5b29cacce70268755af4 *inst/doc/mpactr.R
212d4e13c82547a9f29469c3c04986b1 *inst/doc/mpactr.Rmd
47f99cd6d0e5844e5e6b0cbbf4746f1d *inst/doc/mpactr.html
5a1b2a40d1ac329d9428608304c0a26c *inst/doc/reference_semantics.R
43134e3c5e51f524cb1956b7dc354edb *inst/doc/reference_semantics.Rmd
ca6ace46a18459069674ba193b888769 *inst/doc/reference_semantics.html
b9107a55dc007fb9a32e3302ba33741c *inst/extdata/PTY087I2_dataset.csv
a0ed80f04dd755ce0038e1c905c50080 *inst/extdata/PTY087I2_extractmetadata.csv
06a81c6694691629bb2968381d5e8480 *inst/extdata/PTY087I2_samplelist.csv
60d6234b78be0ed9f43aa44d1c2ddbee *inst/extdata/coculture_peak_table.csv
6771232bcfa501145eccbb4bc150954c *inst/extdata/cultures_metaboscape_metadata.csv
99f57f1bf6d468d6e9a076013e41ea52 *inst/extdata/cultures_metaboscape_peaktable.csv
f071ca66df30ce6548964fa7d7cbe23b *inst/extdata/cultures_metadata.csv
0f2643c818b64072b085e28361873378 *inst/extdata/cultures_peak_table.csv
556563a15ee470015719857dcbaa9af4 *inst/extdata/ion_masses/DefinedIons.csv
c24262e66b845ec5bba326fca7355c32 *inst/extdata/metadata.csv
50b61fe0972d8235f56366212f52a528 *man/cultures_data.Rd
6a808821b7e851fabc7a437e4b569832 *man/example_path.Rd
251052b9bdbc082366891e849beda9d0 *man/figures/logo.png
ee83137ac55b94068ca1a3d755e3fcdb *man/filter_cv.Rd
17d7393109f0da2f8509237c8dc8d1ba *man/filter_group.Rd
94641c40adbe5755691b5059635db755 *man/filter_insource_ions.Rd
4fa1e2218ebd3e10d16b104240ea984b *man/filter_mispicked_ions.Rd
3d5106a10f440e7be86ddb43a8f7bebc *man/filter_summary.Rd
8ecf9072a97b7775da3abd7ad6c3178c *man/get_cv_data.Rd
5c0ace84257f9e057ea94088a50da0e8 *man/get_group_averages.Rd
a5e3dec691df938ce9236eff2cfbbf9b *man/get_meta_data.Rd
df6971b96e489330c9358fd57130c0dd *man/get_peak_table.Rd
7d7888ee548e417901a7c60eb4ca99d2 *man/get_raw_data.Rd
09899fdfc8e80093e0b96d0d0d7c3584 *man/get_similar_ions.Rd
01640db48e6ce7742cdafa9256146260 *man/import_data.Rd
c01400f4fa1ca17ed2ccd3643f7ebd1a *man/mpactr-package.Rd
1ab57333e08b14b712b8eaa08f473f25 *man/plot_qc_tree.Rd
fa1c947b1af0f2bac4743a52d8eab89d *man/qc_summary.Rd
65adfd82806188b897ff630368b985f9 *src/CvFilter.cpp
84bd6fa625d83cc20c1ad1ce4b1e71e2 *src/CvFilter.h
6a1f95de2c6ee983e7851c3bf1f68805 *src/FeatureData.h
03cc4c2d6cade3f02a0420cce4dadbc9 *src/IntensityPeaks.h
68b329da9893e34099c7d8ad5cb9c940 *src/Makevars
c537af6c2d9a4c6104836667b8839f19 *src/Math.h
06d8d78169d96be629c73bceda831148 *src/RcppExports.cpp
4daf2d18a323b95bb0d34fdcc0236771 *src/main.cpp
4b7307d9280862db521991a23653b06f *tests/testthat.R
f6fdea0003f2f5bb53c1c2b948f1b307 *tests/testthat/exttestdata/102623_MonoVCoculture_pt.csv
c24262e66b845ec5bba326fca7355c32 *tests/testthat/exttestdata/102623_metadata_correct.csv
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f6fdea0003f2f5bb53c1c2b948f1b307 *tests/testthat/exttestdata/102623_peaktable_MonoVsCoculture_expandedgradient.csv
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71f005c4e28dd1b2290ac048ba8fe978 *tests/testthat/exttestdata/102623_peaktable_coculture_simple/iondict.csv
4a13cc137a87b80c281629139d01fe5b *tests/testthat/exttestdata/102623_peaktable_coculture_simple_groupaverages.csv
1b7ab65ae3aabc39d00f73599282b442 *tests/testthat/exttestdata/102623_peaktable_coculture_simple_merged.csv
457e209eed85a90f716697f315ce273e *tests/testthat/exttestdata/102623_samplelist.csv
f5985da1dd9afdaad393812323902a72 *tests/testthat/exttestdata/MJB_MonoVSCoculture_metaboscape_ft.csv
328c10cf804906c98637814c81270361 *tests/testthat/exttestdata/cut_ions.csv
2dd9be86dd1f5fa8e011e5bf4785953e *tests/testthat/exttestdata/expected_treemap.RDS
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60a867f225e8bc2115b45468d7e409df *tests/testthat/exttestdata/msdata_blankfilterg.csv
e4e570853c69a4dbbfd0f51dbbdbc063 *tests/testthat/exttestdata/msdata_blankfilterg_abundance.csv
26ba058e34ecb43f44b986223cfc0de7 *tests/testthat/exttestdata/msdata_errprop_mean_full.csv
e82bc79148a3d95774187f0f239ba51c *tests/testthat/exttestdata/output_ANG18_monoculture.csv
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1d03441a98377827cdb5cd9a15a928a8 *tests/testthat/exttestdata/output_Blanks
306d5de567608639d72379762e3cb18e *tests/testthat/exttestdata/output_Coculture
76500e20f7d9cdd8a473853275fb634f *tests/testthat/exttestdata/output_JC1_monoculture
10b8c0c6b49bdfe8ce4077974642160f *tests/testthat/exttestdata/output_JC28_monoculture
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9ea38c075703363601c7ea489e3b8114 *tests/testthat/test-data.R
b8154ae02912e507cc00c276a4fffcc4 *tests/testthat/test-filter_pactr-accessors.R
4a0b8254b7fa28fa5b6828bd87321a07 *tests/testthat/test-filter_pactr-class.R
24623f5d7ffed2fd360b8bacaf83f39b *tests/testthat/test-filter_pactr-methods.R
5f9b512f3f7475589613d392b5140ae0 *tests/testthat/test-filters.R
ac87819d2c25468c3a4faab50d7b1e1e *tests/testthat/test-import_data.R
20f0ded9ee8c79987cc5580d019b3134 *tests/testthat/test-mpactr-accessors.R
1b6f8cda2bc8ff9e02f301b13014f894 *tests/testthat/test-mpactr-class.R
d875b7262abdd39eec3a9535aa3c0326 *tests/testthat/test-mpactr-methods.R
e0a8a47c38bf91f82537cf2c15b03b07 *tests/testthat/test-pactr-class_cloning.R
1ca59afb5b55943fbf7035fc5ddd233d *tests/testthat/test-peak_table_formatter.R
b4514c64cf0a04be8c6286d6f4548563 *tests/testthat/test-qc_graph_pactr-class.R
0071273037db75fe2d3ce040474b000b *tests/testthat/test-quality_control.R
4c5bb4274d83eea1b012e6d85b15f3e4 *tests/testthat/test-statistics.R
bc3cc3918ec260b27d9677421f6b9d9c *tests/testthat/test-summary-class.R
72bf27f88a20235fabb9fb8b4e72e282 *vignettes/downstream_analyses.Rmd
212d4e13c82547a9f29469c3c04986b1 *vignettes/mpactr.Rmd
43134e3c5e51f524cb1956b7dc354edb *vignettes/reference_semantics.Rmd
