86ec14b59261c6f09a9485db99ff28c2 *DESCRIPTION
44a114784e0df786e17c58aebd4cbd4f *NAMESPACE
ff1d99d29cef4b5889883950e0c36684 *NEWS.md
908ded7f5d79a72d002e59c235a1adff *R/BEAST.output.R
154b0d6d10c1495a42843e73caa78298 *R/FossilSim.R
8af839c163c97f040a1c8c6596cf17d4 *R/SAtree.R
877bc312800200796a0c2dd7c677fc75 *R/conversions.R
0ea777deabef948ce3dd8a75a65f39b8 *R/fbdrange.R
e62f7d6d2ef1de1ce20413d765600f3a *R/fossils.R
0f374b95235b40d6d439bde77a919fd7 *R/plot.asymmetric.tree.R
0f642b06ebb457249a42bc35cf1e5381 *R/plot.fbdrange.R
5915cab145dc69244a0887acaa00b0b6 *R/plot.fossils.R
6e6e01a2ef1bdb344f8102e37065660d *R/plot.taxonomy.R
05a0c593ae068793c72c248bee7c272e *R/reconcile.fossils.taxonomy.R
66dab7f1d46fa3c643dca8182d3d109c *R/sim.fbd.R
441ed20563d266a5704723a095bd5d34 *R/sim.fossils.R
8c570e78ddf9adf87bcb4f83a7b2abde *R/sim.interval.ages.R
5833daf37230efd9368c51c2094b4576 *R/sim.taxonomy.R
d04ee6ef52935fa320211665ccf48032 *R/sim.tip.sampling.R
1f650f11a8934ec5f07f68113a668c9c *R/sim.trait.values.R
28a3cf44a2a8bdda544e1bde41c2b10c *R/subsampling.R
d40e39f9079ee6c021e642ee6e41d75d *R/sysdata.rda
945318cf84473cc4ab18c7769c11b659 *R/taxonomy.R
d5d668187d9ce548f94b8ebc207b816d *R/utils.R
a3813243753919509ca9c6efc6f07bfb *README.md
5e06da08a602f88245810008e4ff633a *build/vignette.rds
9fd6e8ae1b8d98aa940e02af59d7ef06 *inst/WORDLIST
8bdd3c48575ea861a56b1a98f43156fe *inst/doc/SAtree.R
ae7ddd113ea0158fa5bc0c7a50485475 *inst/doc/SAtree.Rmd
a610fb9f5ca05d587c6bf40dcb178d68 *inst/doc/SAtree.html
d42a295e918826b0e971a9a9177e3aa5 *inst/doc/fossils.R
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5b625dfe23ee2b9919ff68e68f43fe97 *inst/doc/fossils.html
04d1b506a3be670303f3a48a31fd2f34 *inst/doc/intro.R
027f9eb90ea642137ef1ff6c10e1211f *inst/doc/intro.Rmd
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1e7f6ec7b7c90f6c0d146496305d595b *inst/doc/paleotree.R
3eae3b61fa4e8c9db2ee4a7ce432891e *inst/doc/paleotree.Rmd
a2e2e087bb1b575e9e30db66d3bd47f5 *inst/doc/paleotree.html
baf886040a0fe5b998a32395deb65f76 *inst/doc/simfbd.R
adb95ca82f08c24c657683d57c1354f1 *inst/doc/simfbd.Rmd
992bb7cf03255cf641b360f75d82e360 *inst/doc/simfbd.html
866487974ffebe096bc74e04c60402d1 *inst/doc/taxonomy.R
ad9f9e69b52cce9fb0ca6f9b58c0c5cb *inst/doc/taxonomy.Rmd
4267c9f8e8b0ef4c1de0f54070d3c9fa *inst/doc/taxonomy.html
ebd807e6aa3ec6cc2c4623d69123f523 *inst/extdata/fbdrange.trees
78e9c5803226d8a070508fff2f874c3d *man/FossilSim.Rd
aef0adf5732615749b3bcbd72e6faa7f *man/SAtree.Rd
145fb544caa3643c460bd7e44b257bde *man/SAtree.from.fossils.Rd
c11e9d733bdb8baa77eb5496a7c8a3be *man/beast.fbd.format.Rd
784acda1ebd3e27021ca311d41812953 *man/count.fossils.Rd
26d1e7eae61357a7aaf1c262e7c36dd5 *man/count.fossils.binned.Rd
c3386304a5411bcc516f18a9c0562136 *man/fbdrange.Rd
a793f20bab24bb26eacc2e8cd6ca20ed *man/fossils.Rd
9f8c5b5dbce1aebc4bdfe82786bc6a86 *man/fossils.to.BEAST.constraints.Rd
45a9f67de1f774843ece8d17ec37d66e *man/fossils.to.BEAST.start.tree.Rd
85b790cc62ddf2619fae561eb7295f5b *man/fossils.to.paleotree.record.Rd
f96e6132e95861e32a0af1f4c05d5a76 *man/fossils.to.pyrate.Rd
7840e1b2dd02394acb1a7d94a822ce5b *man/get.tip.descs.Rd
27893fcdf72b26e0b6bcff24517e4439 *man/get_fbdrange_from_file.Rd
3077d36e565082959021bee8dde5d10f *man/paleotree.record.to.fossils.Rd
0e8f6fc11e83270431b2550c85e04634 *man/place.fossils.Rd
6a940398fbf465340cd92d3f5081b1c8 *man/plot.fbdrange.Rd
74f5cbe7c18eb823f68005557dc0c9c2 *man/plot.fossils.Rd
f7ba026284d35c481bca4d2d3676f33a *man/plot.taxonomy.Rd
eac8423301516ee43eee1352a7a3ad76 *man/prune.fossil.tips.Rd
e383807a5343bf26f1769410c198c1e7 *man/prune.fossils.Rd
b038d43d5e88835218e9f447a2f3b1ff *man/rangeplot.asymmetric.Rd
940a0503c3969aaaf2644a81f4df25d0 *man/reconcile.fossils.taxonomy.Rd
6a0477269679a610076a4e9eb836c98f *man/reconstructed.tree.fossils.objects.Rd
c99b4b08ba7c89b1154e245e3a606f01 *man/remove.stem.fossils.Rd
16bc5b5194ecac8de435a6eb2dd3a18d *man/remove.stem.lineages.Rd
1749c66d8825489d8f895a6de1af0c58 *man/sampled.tree.from.combined.Rd
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2f2e0d2543fe7dcdc44b925ca03e72ec *man/sim.cryptic.species.Rd
b112691548adb9aec0cd72259c557db8 *man/sim.extant.samples.Rd
fffb761c797e56fe74e2cb53fb8cdd06 *man/sim.fbd.age.Rd
b9bf62ba90ee3e23866fbc9d1e332e03 *man/sim.fbd.rateshift.taxa.Rd
e836fb6e790b65d4290c19760c70c164 *man/sim.fbd.taxa.Rd
4c9579ed80de6731ba0c6562e743c110 *man/sim.fossils.environment.Rd
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a33caaea1cbc8c90a8fcc559e9a9bab9 *man/sim.fossils.poisson.Rd
e455213dff1a46cb0f72839c1852cc75 *man/sim.gradient.Rd
dcf6779cf5cd757c868cf830bee1dbcb *man/sim.interval.ages.Rd
ece02374e2f825f24f2307ae35f47ff2 *man/sim.taxonomy.Rd
d04fc285139e67b17ddfcfecbd9e37dd *man/sim.tip.samples.Rd
3b3e609a21ab58658bf35e9e6cca1c2b *man/sim.trait.values.Rd
be85ef28203ad07614b6809933de3db6 *man/species.end.Rd
0948b357ea93487272899adf4b231624 *man/species.start.Rd
2daf8099eb7e3d09454a21516d652b51 *man/subsample.fossils.oldest.Rd
1a301acc163977c6c3cb932457d0ac28 *man/subsample.fossils.oldest.and.youngest.Rd
541ecbe8e450632f602db1ec51737ec3 *man/subsample.fossils.uniform.Rd
a1caa796363d806251f7b4473a44f997 *man/subsample.fossils.youngest.Rd
86bf597343c1173952fb694f87b45876 *man/summary.taxonomy.Rd
ea8236f8b61ec4ae567b9d37bbd207a2 *man/taxonomy.Rd
f15687535d2ae0506945c9c06f90f40a *man/tree.max.Rd
ae7ddd113ea0158fa5bc0c7a50485475 *vignettes/SAtree.Rmd
fac92ffd26566d94e307719be0fc594b *vignettes/bibliography.bib
1e98c683c934de5bab33f40e66c15c2e *vignettes/fossils.Rmd
027f9eb90ea642137ef1ff6c10e1211f *vignettes/intro.Rmd
f3575ac8c50a63d666be211135cef145 *vignettes/mee.csl
3eae3b61fa4e8c9db2ee4a7ce432891e *vignettes/paleotree.Rmd
adb95ca82f08c24c657683d57c1354f1 *vignettes/simfbd.Rmd
374a1ba7524e3cb245843c7279bd4e1c *vignettes/speciation_types.jpg
ad9f9e69b52cce9fb0ca6f9b58c0c5cb *vignettes/taxonomy.Rmd
