# Generated by roxygen2: do not edit by hand

S3method(KEGG_gather,KO)
S3method(KEGG_gather,cpd)
S3method(KEGG_gather,rxn)
S3method(plate_omelette,KO)
S3method(plate_omelette,genes)
S3method(plate_omelette,rxn)
export(KEGG_gather)
export(PCA_plot)
export(assign_hierarchy)
export(check_zeros)
export(count_fold_changes)
export(get_seqs)
export(make_omelette)
export(omu_anova)
export(omu_summary)
export(pie_chart)
export(plate_omelette)
export(plate_omelette_rxnko)
export(plot_bar)
export(plot_boxplot)
export(plot_heatmap)
export(plot_rf_PCA)
export(plot_variable_importance)
export(plot_volcano)
export(ra_table)
export(random_forest)
export(read_metabo)
export(transform_metabolites)
export(transform_samples)
import(ggfortify)
importFrom(FSA,dunnTest)
importFrom(broom,tidy)
importFrom(caret,confusionMatrix)
importFrom(dplyr,filter)
importFrom(dplyr,group_by)
importFrom(dplyr,if_else)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,summarise_all)
importFrom(ggplot2,aes)
importFrom(ggplot2,autoplot)
importFrom(ggplot2,coord_flip)
importFrom(ggplot2,coord_polar)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_grid)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_bar)
importFrom(ggplot2,geom_boxplot)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,scale_alpha_manual)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_fill_gradient)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_shape_manual)
importFrom(ggplot2,scale_size_manual)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(ggplot2,xlab)
importFrom(httr,GET)
importFrom(httr,content)
importFrom(httr,message_for_status)
importFrom(magrittr,"%>%")
importFrom(plyr,ddply)
importFrom(plyr,ldply)
importFrom(plyr,llply)
importFrom(plyr,numcolwise)
importFrom(randomForest,randomForest)
importFrom(rstatix,games_howell_test)
importFrom(stats,Pair)
importFrom(stats,TukeyHSD)
importFrom(stats,aggregate)
importFrom(stats,aov)
importFrom(stats,as.formula)
importFrom(stats,complete.cases)
importFrom(stats,p.adjust)
importFrom(stats,prcomp)
importFrom(stats,predict)
importFrom(stats,reorder)
importFrom(stats,reshape)
importFrom(stats,sd)
importFrom(stats,t.test)
importFrom(stats,terms)
importFrom(stats,wilcox.test)
importFrom(stringr,str_detect)
importFrom(stringr,str_replace_na)
importFrom(stringr,str_split)
importFrom(stringr,str_trim)
importFrom(tidyr,drop_na)
importFrom(utils,read.csv)
importFrom(utils,stack)
