candidate.rxlr          An example of 'effector.summary' output
effectR                 effectR: An R Package to Call Oomycete
                        Effectors
effector.summary        Returns non-redundant sequences from hmm.search
                        or regex.search and generates a motif table
hmm.logo                Plots the relative frequencies of each position
                        for 'hmmsearch' table.
hmm.search              Searching for motifs using HMM searches
regex.search            Searching for motifs using regular expressions
                        (REGEX)
shiny.effectR           Function to run the effectR package using a
                        shiny app
