bathy                   Southern Newfoundland bathymetry
convert_N               Convert abundance-at-age matrix to
                        abundance-at-length
error_stats             Calculate common error statistics
expand_surveys          Set-up a series of surveys from all
                        combinations of settings supplied
fibonacci               Generate Fibonacci sequence
group_lengths           Convert length to length group
icc                     Calculate intraclass correlation
land                    Southern Newfoundland coastline
make_grid               Make a depth stratified survey grid
make_mesh               Make an R-INLA mesh based off a grid
object_size             Print object size
plot_trend              Simple plotting functions
round_sim               Round simulated population
run_strat               Run stratified analysis on simulated data
sim_R                   Simulate starting abundance, random recruitment
                        and total mortality
sim_abundance           Simulate basic population dynamics model
sim_ays_covar           Simulate age-year-space covariance
sim_ays_covar_spde      Simulate age-year-space covariance using SPDE
                        approach
sim_distribution        Simulate spatial and temporal distribution
sim_logistic            Closure for simulating logistic curve
sim_nlf                 Define a non-linear relationship
sim_parabola            Define a parabolic relationship
sim_sets                Simulate survey sets
sim_survey              Simulate stratified-random survey
sim_survey_parallel     Simulate stratified random surveys using
                        parallel computation
sim_vonB                Closure for simulating length given age using
                        von Bertalanffy notation
strat_data              Prepare simulated data for stratified analysis
strat_error             Calculate error of stratified estimates
strat_means             Calculate stratified means, variances and
                        confidence intervals across groups
survey_grid             Sample survey simulation grid.
survey_lite_mesh        Lite sample survey mesh and related items
survey_mesh             Sample survey meshes and related items
test_surveys            Test sampling design of multiple surveys using
                        a stratified analysis
vis_sim                 Make a flexdashboard for visualizing the
                        simulation
