assemble_pEmit	assemble_pEmit
assemble_pEmit_phased	assemble_pEmit_phased
assemble_pInit	assemble_pInit
assemble_pInit_phased	assemble_pInit_phased
assemble_Q	assemble_Q
compute_Q1	compute_Q1
GroupGenotypes_wrapper	GroupGenotypes_wrapper
GroupHaplotypes_wrapper	GroupHaplotypes_wrapper
knockoffDMC	knockoffDMC
knockoffDMC_wrapper	knockoffDMC_wrapper
knockoffGenotypes	knockoffGenotypes
knockoffHaplotypes	knockoffHaplotypes
knockoffHMM	knockoffHMM
knockoffHMM_wrapper	knockoffHMM_wrapper
loadEMParameters	loadEMParameters
loadHMM	loadHMM
rand_weighted	rand_weighted
runFastPhase	runFastPhase
sampleDMC	sampleDMC
sampleHMM	sampleHMM
writeXtoInp	writeXtoInp
