bin_calculate           Get bin averages for VPR and CTD data
bin_cast                Bin vpr data
concentration_category
                        Binned concentrations
ctd_cast                Isolate ascending or descending section of ctd
                        cast
ctd_dat_combine         VPR CTD data
ctd_df_cols             Read CTD data (SBE49) and Fluorometer data from
                        CTD- VPR package
ctd_roi_merge           VPR CTD data combined with tabulated ROIs
ctd_roi_oce             VPR data including CTD and ROI information
getRoiMeasurements      THIS FUNCTION HAS BEEN DEPRECATED
insertRow               INTERNAL USE ONLY quick data frame function
                        from github to insert row inside dat frame
isopycnal_calculate     Get vector to draw isopycnal lines on TS plot
                        Used internally to create TS plots
normalize_matrix        Normalize a matrix
px_to_mm                Get conversion factor for pixels to mm for roi
                        measurements
roi_dat_combine         VPR ROI data
roimeas_dat_combine     VPR measurement data calculated by Visual
                        Plankton
size_df_f               VPR size information dataframe
taxa_conc_n             A binned data frame of concentration data per
                        category
vp_plot_matrix          Plots normalized confusion matrix
vp_plot_unkn            Function to visualize losses to unknown
                        category due to disagreement in Dual classifier
vpr_autoid_check        Checks manually created aid files for errors
vpr_autoid_copy         Copy VPR images into folders
vpr_autoid_create       Modifies aid and aid mea files based on manual
                        reclassification
vpr_autoid_read         Read VPR aid files
vpr_category            Get taxa ids from string
vpr_category_create     Create a new taxa to be considered for
                        classification after processing with VP
vpr_ctd_files           Create a list of ctd files to be read
vpr_ctd_read            Read and format CTD VPR data
vpr_ctd_ymd             Add Year/ month/ day hour:minute:second
                        information
vpr_ctdroi_merge        Merge CTD and ROI data from VPR
vpr_ctdroisize_merge    Format CTD and Size data from VPR
vpr_day                 Get day identifier
vpr_dayhour             Find day & hour info to match each station of
                        interest for processing
vpr_hour                Get hour identifier
vpr_img_category        Explore images by depth and classification
vpr_img_check           Remove ROI strings from aid and aidmeas files
                        based on a manually organized folder of images
vpr_img_copy            Image copying function for specific taxa of
                        interest
vpr_img_depth           Explore VPR images by depth bin
vpr_img_reclassified    Explore reclassified images
vpr_manual_classification
                        Function to check results of classification
                        manually
vpr_oce_create          Create ctd oce object with vpr data
vpr_plot_TS             Make a balloon plot against a TS plot
vpr_plot_TScat          Make a balloon plot
vpr_plot_contour        Interpolated contour plot of particular
                        variable
vpr_plot_histsize       Plot size frequency histogram
vpr_plot_profile        Plots VPR profiles of temperature, salinity,
                        density, fluorescence and concentration (by
                        classification group)
vpr_plot_sizefreq       Size Frequency plots for VPR data
vpr_roi                 Get roi ids from string
vpr_roi_concentration   Calculate VPR concentrations
vpr_save                Save VPR data as an as.oce object
vpr_size_bin            Bin VPR size data
vpr_summary             Data Summary Report
vpr_trrois_size         Get size data from idsize files
