check_all               Run automatic sanity checks
create_map              Plot the map report on the epitweetr dashboard
create_topchart         Plot the top elements for a specific series on
                        the epitweetr dashboard
create_topwords         Plot the top words report on the epitweetr
                        dashboard
detect_loop             Runs the detect loop
download_dependencies   Updates Java dependencies
ears_t_reweighted       algorithm for outbreak detection, extends the
                        EARS algorithm
epitweetr_app           Run the epitweetr Shiny app
fs_loop                 Runs the epitweetr embedded database loop
generate_alerts         Execute the alert task
geolocate_text          geolocate text in a data frame given a text
                        column and optionally a language column
get_aggregates          Getting already aggregated time series produced
                        by 'detect_loop'
get_alerts              Getting signals produced by the task
                        'generate_alerts' of 'detect_loop'
get_tasks               Get the 'detect_loop' task status
get_todays_sample_tweets
                        Get a sample of latest tweet geolocations
                        (removed)
health_check            Send email to administrator if a failure of
                        epitweetr is detected
json2lucene             Function used for migrating tweets from to old
                        to the new file system
register_fs_monitor     Registers the fs_monitor for the current
                        process or exits
save_config             Save the configuration changes
search_loop             Runs the search loop
search_tweets           perform full text search on tweets collected
                        with epitweetr
set_twitter_app_auth    Save Twitter App credentials
setup_config            Load epitweetr application settings
trend_line              Plot the trendline report of epitweetr
                        dashboard
update_geonames         Updates the local copy of the GeoNames database
update_languages        Updates local copies of languages
