Package: MAAPER
Title: Analysis of Alternative Polyadenylation Using 3' End-Linked
        Reads
Version: 1.1.1
Authors@R: 
    person(given = "Wei Vivian",
           family = "Li",
           role = c("aut", "cre"),
           email = "vivian.li@rutgers.edu",
           comment = c(ORCID = "0000-0002-2087-2709"))
Description: A computational method developed for model-based analysis of alternative polyadenylation (APA) using 3' end-linked reads. It accurately assigns 3' RNA-seq reads to polyA sites through statistical modeling, and generates multiple statistics for APA analysis. Please also see Li WV, Zheng D, Wang R, Tian B (2021) <doi:10.1186/s13059-021-02429-5>.
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.1.1
Imports: parallel, GenomicRanges, GenomicAlignments, GenomicFeatures,
        GenomeInfoDb, stats, utils, Rsamtools, IRanges, MASS
URL: https://github.com/Vivianstats/MAAPER,
        https://genomebiology.biomedcentral.com/articles/10.1186/s13059-021-02429-5
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2021-08-14 00:15:35 UTC; wei
Author: Wei Vivian Li [aut, cre] (<https://orcid.org/0000-0002-2087-2709>)
Maintainer: Wei Vivian Li <vivian.li@rutgers.edu>
Repository: CRAN
Date/Publication: 2021-08-14 14:20:05 UTC
Built: R 4.0.2; ; 2021-08-15 10:29:10 UTC; unix
