EMcvfusedlasso          cross validation for EM fused-lasso
EMcvlasso               cross validation for 'EMlasso'
EMfusedlasso            EM algorithm for fused-lasso penalty
EMlasso                 EM algorithm for lasso penalty
HDPenReg-package        Algorithms for lasso and fused-lasso problems.
HDcvlars                cross validation
HDfusion                Fusion algorithm
HDlars                  Lars algorithm
LarsPath-class          Constructor of LarsPath class
coef.LarsPath           Compute coefficients
coeff                   get coefficients at a given step.
computeCoefficients     Compute coefficients
listToMatrix            List to sparse matrix conversion
plot-methods            plot methods for LarsPath object
plot.HDcvlars           plot cross validation mean square error
plotCoefficient         Plot of coefficients
predict.LarsPath        Prediction of response
simul                   Simulate copy number data for a case-control
                        study.
