ArchaeoPhases           ArchaeoPhases: Post-Processing of the Markov
                        Chain Simulated by 'Chronomodel', 'OxCal', or
                        'BCal'.
CreateMinMaxGroup       Construct the minimum and maximum for a group
                        of events (phase)
CredibleInterval        Bayesian credible interval
DatesHiatus             Test for the existence of a hiatus between two
                        parameters
Events                  Events
ImportCSV               Importing a CSV file
ImportCSV.BCal          Importing a BCal csv file
MarginalPlot            Plot a marginal posterior density
MarginalProba           Bayesian test for anteriority / posteriority
                        between two parameters
MarginalStatistics      Marginal summary statistics
MultiCredibleInterval   Bayesian credible interval for a series of
                        dates
MultiDatesPlot          Plot of credible intervals or HPD regions of a
                        series of events
MultiHPD                Bayesian HPD regions for a series of MCMC
                        chains
MultiMarginalPlot       Marginal posterior densities of several events
MultiPhasePlot          Several phase density plots
MultiPhaseTimeRange     Phase time range for multiple groups
MultiPhasesGap          Gap or hiatus between a succession of groups
                        (for groups in temporal order constraint)
MultiPhasesTransition   Transition range for a succession of groups
                        (for groups in temporal order constraint)
MultiSuccessionPlot     Successive Phases Density Plots (for phases in
                        temporal order constraint)
OccurrencePlot          Plot occurrences
PhaseDurationPlot       Plot the duration of a group
PhasePlot               Plot the characteristics of a group of events
PhaseStatistics         Summary statistics of a phase
PhaseTimeRange          Phase time range
Phases                  Phases
PhasesGap               Gap or hiatus between two successive phases
                        (for phases in temporal order constraint)
PhasesTransition        Transition range between two successive phases
                        (for phases in temporal order constraint)
SuccessionPlot          Density plots of two successive groups (for
                        groups in temporal order constraint)
TempoActivityPlot       Plot the derivative of the tempo plot Bayesian
                        estimate
TempoPlot               Tempo plot
allen_analyze           Analyze composite relations
allen_basic_relation_set
                        The basic Allen relation set
allen_basic_relation_strings
                        Allen basic relation set as strings
allen_composition       Composition of two Allen relations
allen_concurrent_relations
                        Allen concurrent relation set
allen_create_concurrent_vector
                        Create a result vector identifying concurrent
                        relations
allen_create_distinct_endpoint_vector
                        Create a result vector for relations with
                        distinct endpoints
allen_create_result_vector
                        Create a named result vector
allen_ensure_set_vector
                        Ensure an Allen set is represented as a vector
                        of single character strings
allen_illustrate        Illustrate basic and composite relations
allen_is_result_vector
                        Test whether an object is a result vector
allen_is_set_string     Test if an object is a set string
allen_is_set_vector     Test if an object is a set vector
allen_joint_concurrency
                        Joint concurrence of two or more observed
                        intervals
allen_lattice_x         Nokel lattice x coordinates
allen_lattice_y         Nokel lattice y coordinates
allen_observe           Observe the relation between two phases, each
                        representing an interval of time
allen_observe_frequency
                        Observed frequency of an Allen set
allen_plot              Make a single plot of a Nökel lattice.
allen_proportion_result
                        Calculate the proportion of each relation in a
                        result vector
allen_relate_intervals
                        Relate two or more observed intervals
allen_relation          Allen relation of two definite intervals
allen_set_to_vector     Convert an Allen relation set to a named vector
allen_six_value_set     Allen relation set for intervals with distinct
                        endpoints.
allen_string_to_set     Convert a string containing Allen relation
                        codes to a relation set
allen_string_to_vector
                        Convert a string containing Allen relation
                        codes to a result vector
allen_union             Union of two Allen relation sets.
allen_update_result     Update a result vector
analyze_allen_relations
                        Data for an analytic graphic
app_ArchaeoPhases       Run ArchaeoPhases shiny apps
coda.mcmc               Create an 'mcmc.list' object for 'coda' users
composition_lookup_table
                        Construct an Allen composition lookup table
credible_interval       Bayesian credible interval
dates_hiatus            Test for the existence of a hiatus between two
                        MCMC chains.
estimate_range          Estimate ranges from two or more calibrations
illustrate_allen_relations
                        Data for an illustrative graphic
marginal_plot           Plot a marginal posterior density
marginal_statistics     Marginal summary statistics
multi_credible_interval
                        Bayesian credible interval for a series of
                        dates
multi_dates_plot        Plot of credible intervals or HPD regions of a
                        series of events
multi_hpd               Bayesian HPD regions for a series of MCMC
                        chains
multi_marginal_plot     Marginal posterior densities of several events
multi_marginal_statistics
                        Marginal summary statistics for multiple MCMC
                        chains
new_archaeophases_mcmc
                        Constructor for 'archaeophases_mcmc' object
new_archaeophases_plot
                        Constructor for 'archaeophases_plot' object
occurrence_plot         Plot occurrences
original_file           Check for an original mcmc file
original_file.archaeophases_mcmc
                        Check for an original mcmc file
original_file.archaeophases_plot
                        Check for an original 'archaeophases_plot' file
phase_statistics        Summary statistics of a phase
phases_gap              Gap or hiatus between two successive phases
                        (for phases in temporal order constraint)
plot.archaeophases_plot
                        Recreate a graphical plot
read_bcal               Read MCMC output from BCal
read_chronomodel        Read MCMC output from ChronoModel
read_oxcal              Read MCMC output from OxCal
reproduce               Reproduce an MCMC data frame
reproduce.archaeophases_mcmc
                        Reproduce an MCMC data frame
reproduce.archaeophases_plot
                        Reproduce an ArchaeoPhases plot
tempo_activity_plot     Plot the derivative of the tempo plot Bayesian
                        estimate
tempo_plot              Tempo plot
