Var.data                Var.data
Var.data.cc             Var.data
annotate_susie          annotate susie_rss output for use with
                        coloc_susie
approx.bf.estimates     Internal function, approx.bf.estimates
approx.bf.p             Internal function, approx.bf.p
bin2lin                 binomial to linear regression conversion
check_alignment         check alignment
check_dataset           check_dataset
coloc-package           Colocalisation tests of two genetic traits
coloc.abf               Fully Bayesian colocalisation analysis using
                        Bayes Factors
coloc.bf_bf             Coloc data through Bayes factors
coloc.detail            Bayesian colocalisation analysis with detailed
                        output
coloc.process           Post process a coloc.details result using
                        masking
coloc.signals           Coloc with multiple signals per trait
coloc.susie             run coloc using susie to detect separate
                        signals
coloc.susie_bf          run coloc using susie to detect separate
                        signals
coloc_test_data         Simulated data to use in testing and vignettes
                        in the coloc package
combine.abf             combine.abf
est_cond                generate conditional summary stats
estgeno.1.ctl           estgeno1
find.best.signal        Pick out snp with most extreme Z score
findends                trim a dataset to central peak(s)
findpeaks               trim a dataset to only peak(s)
finemap.abf             Bayesian finemapping analysis
finemap.bf              Finemap data through Bayes factors
finemap.signals         Finemap multiple signals in a single dataset
logbf_to_pp             logbf 2 pp
logdiff                 logdiff
logsum                  logsum
map_cond                find the next most significant SNP,
                        conditioning on a list of sigsnps
map_mask                find the next most significant SNP, masking a
                        list of sigsnps
plot.coloc_abf          plot a coloc_abf object
plot_dataset            plot a coloc dataset
print.coloc_abf         print.coloc_abf
process.dataset         process.dataset
runsusie                Run susie on a single coloc-structured dataset
sdY.est                 Estimate trait variance, internal function
sensitivity             Prior sensitivity for coloc
subset_dataset          subset_dataset
