addsamptree	addsamptree
AML43	AML43
canopy.BIC	canopy.BIC
canopy.cluster	canopy.cluster
canopy.cluster.Estep	canopy.cluster.Estep
canopy.cluster.Mstep	canopy.cluster.Mstep
canopy.output	canopy.output
canopy.plottree	canopy.plottree
canopy.post	canopy.post
canopy.sample	canopy.sample
canopy.sample.cluster	canopy.sample.cluster
canopy.sample.cluster.nocna	canopy.sample.cluster.nocna
canopy.sample.nocna	canopy.sample.nocna
getclonalcomposition	getclonalcomposition
getCMCm	getCMCm
getCZ	getCZ
getlikelihood	getlikelihood
getlikelihood.sna	getlikelihood.sna
getQ	getQ
getVAF	getVAF
getZ	getZ
initialcna	initialcna
initialcnacopy	initialcnacopy
initialP	initialP
initialsna	initialsna
MDA231	MDA231
MDA231_sampchain	MDA231_sampchain
MDA231_tree	MDA231_tree
sampcna	sampcna
sampcnacopy	sampcnacopy
sampP	sampP
sampsna	sampsna
sampsna.cluster	sampsna.cluster
sortcna	sortcna
toy	toy
toy2	toy2
toy3	toy3
