HiddenMarkov-package	HiddenMarkov
as.dthmm	HiddenMarkov-internal
as.mmglm0	HiddenMarkov-internal
backward	forwardback
backward0.mmpp	HiddenMarkov-mmpp-deprecated
Baum.Welch	HiddenMarkov-dthmm-deprecated
Baum.Welch.mmpp	HiddenMarkov-mmpp-deprecated
Baum.Welch0.mmpp	HiddenMarkov-mmpp-deprecated
BaumWelch	BaumWelch
BaumWelch.dthmm	BaumWelch
BaumWelch.mmglm0	BaumWelch
BaumWelch.mmglm1	BaumWelch
BaumWelch.mmglmlong1	BaumWelch
BaumWelch.mmpp	BaumWelch
bwcontrol	bwcontrol
Changes	Changes
compdelta	compdelta
Demonstration	Demonstration
dglm	HiddenMarkov-internal
dmmglm	HiddenMarkov-internal
dthmm	dthmm
Estep	Estep
Estep.mmglm1	mmglm-2nd-level-functions
Estep.mmpp	mmpp-2nd-level-functions
Estep0.mmpp	HiddenMarkov-mmpp-deprecated
forward	forwardback
forward0.mmpp	HiddenMarkov-mmpp-deprecated
forwardback	forwardback
forwardback.dthmm	forwardback
forwardback.mmpp	mmpp-2nd-level-functions
getj	HiddenMarkov-internal
HiddenMarkov	HiddenMarkov
HiddenMarkov-defunct	HiddenMarkov-defunct
HiddenMarkov-dthmm-deprecated	HiddenMarkov-dthmm-deprecated
HiddenMarkov-mmpp-deprecated	HiddenMarkov-mmpp-deprecated
logLik	logLik
logLik.dthmm	logLik
logLik.mmglm0	logLik
logLik.mmglm1	logLik
logLik.mmglmlong1	logLik
logLik.mmpp	logLik
logLikmmpp	HiddenMarkov-mmpp-deprecated
makedensity	HiddenMarkov-internal
makedensity1	HiddenMarkov-internal
makedistn	HiddenMarkov-internal
mchain	mchain
mmglm	HiddenMarkov-internal
mmglm-2nd-level-functions	mmglm-2nd-level-functions
mmglm0	mmglm
mmglm1	mmglm
mmglmlong1	mmglm
mmpp	mmpp
mmpp-2nd-level-functions	mmpp-2nd-level-functions
Mstep	Mstep
Mstep.beta	Mstep
Mstep.binom	Mstep
Mstep.exp	Mstep
Mstep.gamma	Mstep
Mstep.glm	Mstep
Mstep.lnorm	Mstep
Mstep.logis	Mstep
Mstep.mmglm1	mmglm-2nd-level-functions
Mstep.norm	Mstep
Mstep.pois	Mstep
neglogLik	neglogLik
pglm	HiddenMarkov-internal
Pi2vector	Transform-Parameters
pmmglm	HiddenMarkov-internal
probhmm	probhmm
Q2vector	Transform-Parameters
residuals	residuals
residuals.dthmm	residuals
residuals.mmglm0	residuals
residuals.mmglm1	residuals
residuals.mmglmlong1	residuals
residuals.mmpp	HiddenMarkov-internal
residualshmm	HiddenMarkov-defunct
sim.hmm	HiddenMarkov-dthmm-deprecated
sim.hmm1	HiddenMarkov-dthmm-deprecated
sim.markov	HiddenMarkov-dthmm-deprecated
sim.mmpp	HiddenMarkov-mmpp-deprecated
simulate	simulate
simulate.dthmm	simulate
simulate.mchain	simulate
simulate.mmglm0	simulate
simulate.mmglm1	simulate
simulate.mmglmlong1	simulate
simulate.mmpp	simulate
summary	summary
summary.dthmm	summary
summary.mmglm0	summary
summary.mmglm1	summary
summary.mmglmlong1	summary
summary.mmpp	summary
Transform-Parameters	Transform-Parameters
vector2Pi	Transform-Parameters
vector2Q	Transform-Parameters
Viterbi	Viterbi
Viterbi.dthmm	Viterbi
Viterbi.mmglm0	Viterbi
Viterbi.mmglm1	Viterbi
Viterbi.mmglmlong1	Viterbi
Viterbi.mmpp	HiddenMarkov-internal
Viterbihmm	HiddenMarkov-dthmm-deprecated
