Package: ProFAST
Type: Package
Title: Probabilistic Factor Analysis for Spatially-Aware Dimension
        Reduction
Version: 1.4
Date: 2024-03-16
Authors@R: 
    c(person(given = "Wei",
             family = "Liu",
             role = c("aut", "cre"),
             email = "liuweideng@gmail.com"),
      person(given = "Xiao",
             family = "Zhang",
             role = c("aut")),
      person(given = "Jin",
             family = "Liu",
             role = "aut"))
Author: Wei Liu [aut, cre],
  Xiao Zhang [aut],
  Jin Liu [aut]
Maintainer: Wei Liu <liuweideng@gmail.com>
Description: Probabilistic factor analysis for spatially-aware dimension reduction across multi-section spatial transcriptomics data with millions of spatial locations.
    More details can be referred to Wei Liu, et al. (2023) <doi:10.1101/2023.07.11.548486>.
License: GPL-3
Depends: R (>= 4.0.0), gtools
Imports: Rcpp (>= 1.0.10), furrr, future, ggplot2, AnnotationDbi,
        DR.SC, Matrix, mclust, PRECAST, pbapply, biomaRt, irlba,
        org.Hs.eg.db, org.Mm.eg.db, Seurat, parallel, harmony, methods,
        stats, utils
LazyData: true
URL: https://github.com/feiyoung/ProFAST
BugReports: https://github.com/feiyoung/ProFAST/issues
Suggests: knitr, rmarkdown, performance, nnet, scater, ggrepel, RANN,
        grDevices
LinkingTo: Rcpp, RcppArmadillo
VignetteBuilder: knitr
Encoding: UTF-8
RoxygenNote: 7.1.2
NeedsCompilation: yes
Packaged: 2024-03-18 01:11:07 UTC; Liuxianju
Repository: CRAN
Date/Publication: 2024-03-18 08:10:06 UTC
Built: R 4.2.3; aarch64-apple-darwin20; 2024-03-18 10:30:36 UTC; unix
Archs: ProFAST.so.dSYM
